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GM01709 Fibroblast from Gonad, Gonad

Description:

DICENTRIC CHROMOSOME
GONADAL DYSGENESIS

Affected:

No Data

Sex:

Female

Age:

11 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Chromosome Abnormalities
dbGaP
Biopsy Source Gonad
Cell Type Fibroblast
Tissue Type Gonad
Transformant Untransformed
Sample Source Fibroblast from Gonad, Gonad
Race White
Relation to Proband proband
Confirmation Karyotypic analysis and Molecular characterization
ISCN 46,X,idic(Y)(p11.2).arr Xp22.33(108464-2704240)x1,Yp11.2q12(10367247-27209311)x2
Species Homo sapiens
Common Name Human
Remarks Gonadal dysgenesis; 8 of 12 karyotypes have an additional t(1;5); biopsy of gonadal streak; DNA from fibroblasts does not hybridize Y-chromosome-specific DNA probes mapping near to the putative testis determining locus

Characterizations

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Passage Frozen 4
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Chromosome Analysis
 
TESTIS DETERMINING LOCUS Muller et. al. (Nucleic Acids Res.14:6489,1986) reported that DNA from these fibroblasts did not hybridize Y-chromosome-specific DNA probes mapping near to the putative testis determining locus.
 
Cytogenetics Chromosome Y: DICENTRIC CHROMOSOME Aneuploid Segment (+)Yp11>Yqter
Chromosome Y: DICENTRIC CHROMOSOME Aneuploid Segment (0)Ypter>Yp11

Phenotypic Data

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Remarks Gonadal dysgenesis; 8 of 12 karyotypes have an additional t(1;5); biopsy of gonadal streak; DNA from fibroblasts does not hybridize Y-chromosome-specific DNA probes mapping near to the putative testis determining locus

Publications

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Tang Z, Berlin DS, Toji L, Toruner GA, Beiswanger C, Kulkarni S, Martin CL, Emanuel BS, Christman M, Gerry NP, A dynamic database of microarray-characterized cell lines with various cytogenetic and genomic backgrounds G3 (Bethesda, Md)3:1143-9 2013
PubMed ID: 23665875
 
Lau EC, Mohandas TK, Shapiro LJ, Slavkin HC, Snead ML, Human and mouse amelogenin gene loci are on the sex chromosomes. Genomics4:162-8 1989
PubMed ID: 2737677
 
Muller U, Donlon T, Schmid M, Fitch N, Richer CL, Lalande M, Latt SA, Deletion mapping of the testis determining locus with DNA probes in 46,XX males and in 46,XY and 46,X,dic(Y) females. Nucleic Acids Res14:6489-505 1986
PubMed ID: 3748818
 
Su TS, Nussbaum RL, Airhart S, Ledbetter DH, Mohandas T, O'Brien WE, Beaudet AL, Human chromosomal assignments for 14 argininosuccinate synthetase pseudogenes: cloned DNAs as reagents for cytogenetic analysis. Am J Hum Genet36:954-64 1984
PubMed ID: 6093508

External Links

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dbSNP dbSNP ID: 17224

Culture Protocols

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Passage Frozen 4
Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Substrate None specified
Subcultivation Method trypsin-EDTA
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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