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GM07158 LCL from B-Lymphocyte

Description:

FUMARATE HYDRATASE; FH
TRANSLOCATED CHROMOSOME

Affected:

No Data

Sex:

Male

Age:

2 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Images
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Hereditary Cancers
Chromosome Abnormalities
dbGaP
Class Other Disorders of Known Biochemistry
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race Other
Family Member 1
Relation to Proband proband
Confirmation Clinical summary/Case history
ISCN 46,XY,der(2)t(1;2)(q32.2;q37)mat.arr 1q32.2q44(206698478-247190999)x3,2q37.3(239367123-242738117)x1
Species Homo sapiens
Common Name Human
Remarks Severely retarded & dysmorphic; Fumarate hydratase activity consistent with trisomy for 1q; 46,XY,-2,+der(2),t(1;2) (2pter>2q37::1q32.1>1qter)mat; unbalanced

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis and by Chromosome Analysis
 
fumarate hydratase According to the submitter, biochemical test results for this subject showed increased enzyme activity. EC Number: 4.2.1.2
 
Cytogenetics Chromosome 1: DERIVATIVE CHROMOSOME Aneuploid Segment (+)1q32>1qter
Chromosome 1: DERIVATIVE CHROMOSOME Trisomic Segment 1q32>1qter
Chromosome 2: DERIVATIVE CHROMOSOME Aneuploid Segment (-)2q37>2qter

Phenotypic Data

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Remarks Severely retarded & dysmorphic; Fumarate hydratase activity consistent with trisomy for 1q; 46,XY,-2,+der(2),t(1;2) (2pter>2q37::1q32.1>1qter)mat; unbalanced

Publications

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Tang Z, Berlin DS, Toji L, Toruner GA, Beiswanger C, Kulkarni S, Martin CL, Emanuel BS, Christman M, Gerry NP, A dynamic database of microarray-characterized cell lines with various cytogenetic and genomic backgrounds G3 (Bethesda, Md)3:1143-9 2013
PubMed ID: 23665875
 
Barr FG, Holick J, Nycum L, Biegel JA, Emanuel BS, Localization of the t(2;13) breakpoint of alveolar rhabdomyosarcoma on a physical map of chromosome 2. Genomics13:1150-6 1992
PubMed ID: 1505949

External Links

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dbSNP dbSNP ID: 16819
Gene Cards FH
Gene Ontology GO:0004333 fumarate hydratase activity
GO:0005739 mitochondrion
GO:0006099 tricarboxylic acid cycle
GO:0006106 fumarate metabolism
GO:0016829 lyase activity
GO:0045239 tricarboxylic acid cycle enzyme complex
GO:0045786 negative regulation of cell cycle
NCBI Gene Gene ID:2271
NCBI GTR 136850 FUMARATE HYDRATASE; FH
OMIM 136850 FUMARATE HYDRATASE; FH
Omim Description FUMARASE DEFICIENCY, INCLUDED
  FUMARASEFUMARATE HYDRATASE, CYTOSOLIC, INCLUDED; FH1, INCLUDED
  FUMARATE HYDRATASE, MITOCHONDRIAL, INCLUDED; FH2, INCLUDED
  FUMARATE HYDRATASE; FH
  FUMARICACIDURIA, INCLUDED

Images

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View karyotype 

Culture Protocols

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Split Ratio 1:5
Temperature 37 C
Percent CO2 5%
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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