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GM01533 Fibroblast

Description:

GALACTOSEMIA
GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE; GALT
TRANSLOCATED CHROMOSOME

Affected:

No Data

Sex:

Female

Age:

19 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Chromosome Abnormalities
Class Disorders of Carbohydrate Metabolism
Cell Type Fibroblast
Transformant Untransformed
Race White
Family Member 6
Relation to Proband sister
Confirmation Molecular characterization after cell line submission to CCR
ISCN 46,X,t(X;3)(Xpter>Xq26::3p12> 3pter;3qter>3p12::Xq26>Xqter)mat [48]/46,XX [2]
Species Homo sapiens
Common Name Human
Remarks Normal transferase and kinase activity in fibroblasts; 46,XX/46,X,t(X;3)(Xpter>Xq26:: 3p12>3pter;3qter>3p12::Xq26>Xqter)mat; bal; 4%/96%; norm X is late replicating; 2 affected sibs; GALT gene mutation is [Gly188Arg (Q188R)]/+

Characterizations

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Passage Frozen 12
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis and by Chromosome Analysis
 
Gene GALT
Chromosomal Location 9p13
Allelic Variant 1 606999.0006; GALACTOSEMIA
Identified Mutation GLN188ARG; Reichardt et al. [Am J Hum Genet 49: 860 (1991)] demonstrated a transition at nucleotide 591 that substituted arginine for glutamine-188. The mutated glutamine is not only highly conserved in evolution, but is also 2 amino acid residues downstream from the active site histidine-proline-histidine triad. Lymphoblasts from subjects homozygous for the GLN188ARG mutation show essentially no detectable GALT activity [Fridovich-Keil and Jinks-Robertson. Proc Nat Acad Sci USA 90: 398 (1993)].

Phenotypic Data

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Remarks Normal transferase and kinase activity in fibroblasts; 46,XX/46,X,t(X;3)(Xpter>Xq26:: 3p12>3pter;3qter>3p12::Xq26>Xqter)mat; bal; 4%/96%; norm X is late replicating; 2 affected sibs; GALT gene mutation is [Gly188Arg (Q188R)]/+

Publications

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Carrel L, Willard HF, Heterogeneous gene expression from the inactive X chromosome: an X-linked gene that escapes X inactivation in some human cell lines but is inactivated in others. Proc Natl Acad Sci U S A96:7364-9 1999
PubMed ID: 10377420
 
LaForgia S, Lasota J, Latif F, Boghosian-Sell L, Kastury K, Ohta M, Druck T, Atchison L, Cannizzaro LA, Barnea G, et al, Detailed genetic and physical map of the 3p chromosome region surrounding the familial renal cell carcinoma chromosome translocation, t(3;8)(p14.2;q24.1). Cancer Res53:3118-24 1993
PubMed ID: 8319219
 
Sieburth D, Jabs EW, Warrington JA, Li X, Lasota J, LaForgia S, Kelleher K, Huebner K, Wasmuth JJ, Wolf SF, Assignment of genes encoding a unique cytokine (IL12) composed of two unrelated subunits to chromosomes 3 and 5. Genomics14:59-62 1992
PubMed ID: 1358798
 
Dobrovic A, Houle B, Belouchi A, Bradley WE, erbA-related sequence coding for DNA-binding hormone receptor localized to chromosome 3p21-3p25 and deleted in small cell lung carcinoma. Cancer Res48:682-5 1988
PubMed ID: 2891438
 
Kaffe S, Beratis NG, Hirschhorn K, Greene AE, Coriell LL, Galactosemia. Repository identification Nos. GM-438 to GM-442. Cytogenet Cell Genet17:62-4 1976
PubMed ID: 181209

External Links

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dbSNP dbSNP ID: 19767
Gene Cards GALT
Gene Ontology GO:0003982 UTP-hexose-1-phosphate uridylyltransferase activity
GO:0006012 galactose metabolism
GO:0008108 UDP-glucose-hexose-1-phosphate uridylyltransferase activity
GO:0016740 transferase activity
NCBI Gene Gene ID:2592
NCBI GTR 230400 GALACTOSEMIA I; GALAC1
606999 GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE; GALT
OMIM 230400 GALACTOSEMIA I; GALAC1
606999 GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE; GALT
Omim Description GALACTOSE-1-PHOSPHATE URIDYLTRANSFERASE DEFICIENCY
  GALACTOSEMIA
  GALT DEFICIENCYGALACTOSE-1-PHOSPHATE URIDYLTRANSFERASE; GALT, INCLUDED

Culture Protocols

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Passage Frozen 12
Split Ratio 1:3
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Substrate None specified
Subcultivation Method trypsin-EDTA
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