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NA22976 DNA from LCL

Description:

CHROMOSOME 1P36 DELETION SYNDROME

Affected:

Yes

Sex:

Male

Age:

6 MO (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Images

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Chromosome Abnormalities
dbGaP
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Relation to Proband proband
Confirmation Karyotypic analysis before cell line submission to CCR
ISCN 47,XY,der(1)(3qter->3q26.3;1p36.3->1qter),+9.arr[hg19] 1p36.33p36.31(707,086-6,864,614)x1,3q26.33q29(182,373,684-197,821,447)x3,9p24.3q34.3(46,586-141,091,382)x3
Species Homo sapiens
Common Name Human
Remarks Clinically affected; dysmorphic facial features; ventricular septal defect; lamellar cataracts; broncho-pulmonary dysplasia; poorly developed lungs; diastasis recti; diffuse hypotonia; seizure onset at 1 month of age, noted by jaw jerking and quivering; polymicrogria, with symmetrical cortical malformation and abnormal white matter; 6.8 MB de novo deletion of chromosome 1p36 (derivative, +3q).

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin confirmed by LINE assay
 
Cytogenetics Chromosome 1: DERIVATIVE CHROMOSOME Aneuploid Segment (+).ish der(1)t(1;3)(p36.33;q27)

Phenotypic Data

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Remarks Clinically affected; dysmorphic facial features; ventricular septal defect; lamellar cataracts; broncho-pulmonary dysplasia; poorly developed lungs; diastasis recti; diffuse hypotonia; seizure onset at 1 month of age, noted by jaw jerking and quivering; polymicrogria, with symmetrical cortical malformation and abnormal white matter; 6.8 MB de novo deletion of chromosome 1p36 (derivative, +3q).

Publications

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Tang Z, Berlin DS, Toji L, Toruner GA, Beiswanger C, Kulkarni S, Martin CL, Emanuel BS, Christman M, Gerry NP, A dynamic database of microarray-characterized cell lines with various cytogenetic and genomic backgrounds G3 (Bethesda, Md)3:1143-9 2013
PubMed ID: 23665875
 
Dobyns WB, Mirzaa G, Christian SL, Petras K, Roseberry J, Clark GD, Curry CJ, McDonald-McGinn D, Medne L, Zackai E, Parsons J, Zand DJ, Hisama FM, Walsh CA, Leventer RJ, Martin CL, Gajecka M, Shaffer LG, Consistent chromosome abnormalities identify novel polymicrogyria loci in 1p363, 2p161-p231, 4q2121-q221, 6q26-q27, and 21q2 American journal of medical genetics Part A146A:1637-54 2008
PubMed ID: 18536050
 
Gajecka M, Mackay KL, Shaffer LG, Monosomy 1p36 deletion syndrome American journal of medical genetics Part C, Seminars in medical genetics145C:346-56 2007
PubMed ID: 17918734

External Links

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NCBI GTR 607872 CHROMOSOME 1p36 DELETION SYNDROME
OMIM 607872 CHROMOSOME 1p36 DELETION SYNDROME
Omim Description MONOSOMY 1p36 SYNDROME

Images

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View FISH FITC detects CEB108/T7,Spectrum Orange detects D3S4560,DAPI counterstain
FISH Texas Red detects SKI,FITC detects D1S3739,DAPI counterstain
karyotype Texas Red detects SKI,FITC detects D1S3739,DAPI counterstain
MicroArray KaryotView of the copy number segment changes detected by the Affymetrix Genome Wide Human SNP Array 6.0
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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How to Order
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  • GM22976 - B-Lymphocyte
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