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NA13715 DNA from LCL

Description:

BREAST CANCER, TYPE 1; BRCA1
BREAST CANCER INFORMATION CORE (BIC) BRCA1/BRCA2 MUTATION PANEL DNA SAMPLES

Affected:

Yes

Sex:

Female

Age:

56 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Hereditary Cancers
GeT-RM Samples
Class Heritable Cancer Syndromes and other Cancers
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Race White
Relation to Proband proband
Confirmation Molecular characterization after cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Positive family history; diagnosed at age 43; BRCA1 germline mutation is 5382insC in exon 20, codon 1755

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis
 
GENE MAPPING & DOSAGE STUDIES - Y CHROMOSOME PCR analysis of DNA from this cell culture gave a negative result with a primer for Yq11, DYS227.
 
MUTATION VERIFICATION For multiply confirmed mutations by the GeT-RM program please click here: MTHFR SERPINA1 RET BRCA1 and BRCA2 Reference Materials characterized by GeT-RM
 
Gene BRCA1
Chromosomal Location 17q21.31
Allelic Variant 1 113705.0018; BREAST-OVARIAN CANCER
Identified Mutation 1-BP INS, 5382C; Simard et al. [Nature Genetics 8: 392-398 (1994)] studied 30 Canadian families with breast and/or ovarian cancer for germline mutations in the coding region of the BRCA1 candidate gene. They identified a 1-bp (C) insertion at position 5382 in exon 20, changing the reading frame of the mRNA and causing a premature termination codon at position 1829 in exon 24.

Phenotypic Data

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Remarks Positive family history; diagnosed at age 43; BRCA1 germline mutation is 5382insC in exon 20, codon 1755

Publications

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Xia Y, Katz M, Chandramohan D, Bechor E, Podgursky B, Hoxie M, Zhang Q, Chertman W, Kang J, Blue E, Chen J, Schleede J, Slotnick NR, Du X, Boostanfar R, Urcia E, Behr B, Cohen J, Siddiqui N, The first clinical validation of whole-genome screening on standard trophectoderm biopsies of preimplantation embryos F&S reports5:63-71 2023
PubMed ID: 38524212
 
Caballero M, Ge T, Rebelo AR, Seo S, Kim S, Brooks K, Zuccaro M, Kanagaraj R, Vershkov D, Kim D, Smogorzewska A, Smolka M, Benvenisty N, West SC, Egli D, Mace EM, Koren A, Comprehensive analysis of DNA replication timing across 184 cell lines suggests a role for MCM10 in replication timing regulation Human molecular genetics5:63-71 2021
PubMed ID: 35394024
 
Michalska D, Jaguszewska K, Liss J, Kitowska K, Mirecka A, Ukaszuk K., Comparison of whole genome amplification and nested-PCR methods for preimplantation genetic diagnosis for BRCA1 gene mutation on unfertilized oocytes--a pilot study. Hered Cancer Clin Pract.11(1)::10 2013
PubMed ID: 23941236
 
Barker SD, Bale S, Booker J, Buller A, Das S, Friedman K, Godwin AK, Grody WW, Highsmith E, Kant JA, Lyon E, Mao R, Monaghan KG, Payne DA, Pratt VM, Schrijver I, Shrimpton AE, Spector E, Telatar M, Toji L, Weck K, Zehnbauer B, Kalman LV, Development and characterization of reference materials for MTHFR, SERPINA1, RET, BRCA1, and BRCA2 genetic testing The Journal of molecular diagnostics : JMD11:553-61 2009
PubMed ID: 19767587
 
Dufresne SD, Belloni DR, Wells WA, Tsongalis GJ, BRCA1 and BRCA2 mutation screening using SmartCycler II high-resolution melt curve analysis. Arch Pathol Lab Med130(2):185-7 2006
PubMed ID: 16454559
 
Manola KN, Terzoudi GI, Dardoufas CE, Malik SI, Pantelias GE, Radioprotective effect of amifostine on cells from cancer prone patients and healthy individuals studied by the G2 and PCC assays International journal of radiation biology79:831-8 2003
PubMed ID: 14630542
 
Castilla LH, Couch FJ, Erdos MR, Hoskins KF, Calzone K, Garber JE, Boyd J, Lubin MB, Deshano ML, Brody LC, et al, Mutations in the BRCA1 gene in families with early-onset breast and ovarian cancer. Nat Genet8:387-91 1994
PubMed ID: 7894491

External Links

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dbSNP dbSNP ID: 11869
Gene Cards BRCA1
Gene Ontology GO:0000151 ubiquitin ligase complex
GO:0003684 damaged DNA binding
GO:0003713 transcription coactivator activity
GO:0004842 ubiquitin-protein ligase activity
GO:0005515 protein binding
GO:0005615 extracellular space
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005667 transcription factor complex
GO:0006357 regulation of transcription from Pol II promoter
GO:0006359 regulation of transcription from Pol III promoter
GO:0006978 DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0008270 zinc ion binding
GO:0008274 gamma-tubulin ring complex
GO:0015631 tubulin binding
GO:0016563 transcriptional activator activity
GO:0016567 protein ubiquitination
GO:0042127 regulation of cell proliferation
GO:0042981 regulation of apoptosis
GO:0045739 positive regulation of DNA repair
GO:0045786 negative regulation of cell cycle
GO:0046600 negative regulation of centriole replication
NCBI Gene Gene ID:672
NCBI GTR 113705 BREAST CANCER 1 GENE; BRCA1
604370 BREAST-OVARIAN CANCER, FAMILIAL, SUSCEPTIBILITY TO, 1; BROVCA1
OMIM 113705 BREAST CANCER 1 GENE; BRCA1
604370 BREAST-OVARIAN CANCER, FAMILIAL, SUSCEPTIBILITY TO, 1; BROVCA1
Omim Description BREAST CANCER 1, EARLY-ONSETBREAST-OVARIAN CANCER, INCLUDED
  BREAST CANCER, TYPE 1; BRCA1
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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