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NA20217 DNA from LCL

Description:

LANGER MESOMELIC DYSPLASIA
SHORT STATURE HOMEOBOX; SHOX

Affected:

Yes

Sex:

Male

Age:

50 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Disorders of Connective Tissue, Muscle, and Bone
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Race White
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected; anthropometric measurements at age 50 years: height = 146.7 cm, weight = 117 lbs, head circumference = 57.8 cm; curvature of forearms noted at birth; increased carrying angle; Madelung's wrist deformity; hydrocele repair; bilateral osteotomies on femurs and derotation of hips for treatment of in toeing during childhood; attention-deficit disorder diagnosed in adulthood; acid reflux; donor subject is a compound heterozygote: one allele has a complete deletion of one SHOX gene and a second allele has a deletion of DXYS233. Exon duplications or deletions were not ruled out, apart from the deletions detected by FISH with a SHOX cosmid.

Characterizations

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Gene SHOX
Chromosomal Location Xpter-p22.32
Allelic Variant 1 312865.0003; LANGER MESOMELIC DYSPLASIA
Identified Mutation DEL; In a fetus with Langer mesomelic dysplasia (249700), Belin et al. (1998) confirmed deletion of both SHOX alleles by fluorescence in situ hybridization. The mother, who had dyschondrosteosis (127300), was found to be heterozygous at this locus. Belin et al. (1998) showed that Langer mesomelic dysplasia results from homozygous mutations at the SHOX locus. Shears et al. (1998) likewise demonstrated a role for homozygous deletion involving the SHOX gene in the etiology of Langer dysplasia.
 
Gene SHOX
Chromosomal Location Xpter-p22.32
Allelic Variant 2 ; LANGER MESOMELIC DYSPLASIA
Identified Mutation del DXYS233

Phenotypic Data

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Remarks Clinically affected; anthropometric measurements at age 50 years: height = 146.7 cm, weight = 117 lbs, head circumference = 57.8 cm; curvature of forearms noted at birth; increased carrying angle; Madelung's wrist deformity; hydrocele repair; bilateral osteotomies on femurs and derotation of hips for treatment of in toeing during childhood; attention-deficit disorder diagnosed in adulthood; acid reflux; donor subject is a compound heterozygote: one allele has a complete deletion of one SHOX gene and a second allele has a deletion of DXYS233. Exon duplications or deletions were not ruled out, apart from the deletions detected by FISH with a SHOX cosmid.

Publications

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Andrew M. Gross PhD, Subramanian S. Ajay PhD, Vani Rajan MS, Carolyn Brown CGC, Krista Bluske PhD, Nicole J. Burns MS, Aditi Chawla PhD, Alison J. Coffey PhD, Alka Malhotra PhD, Alicia Scocchia MS CGC, Erin Thorpe MS CGC, Natasa Dzidic MS, Karine Hovanes PhD FACMG, Trilochan Sahoo MD FACMG, Egor Dolzhenko PhD, Bryan Lajoie PhD, Amirah Khouzam MS CGC, Shimul Chowdhury PhD FACMG, John Belmont MD PhD, Eric Roller PhD, Sergii Ivakhno PhD, Stephen Tanner PhD, Julia McEachern PA MHS, Tina Hambuch PhD FACMG, Michael Eberle PhD, R. Tanner Hagelstrom PhD FACMG, David R. Bentley PhD, Denise L. Perry MS CGC & Ryan J. Taft PhD, Copy-number variants in clinical genome sequencing: deployment and interpretation for rare and undiagnosed disease Genetics in Medicine: 2018
PubMed ID: 30293986

External Links

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dbSNP dbSNP ID: 22003
Gene Cards SHOX
Gene Ontology GO:0001501 skeletal development
GO:0003700 transcription factor activity
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-dependent
GO:0006366 transcription from Pol II promoter
GO:0007275 development
NCBI Gene Gene ID:6473
NCBI GTR 249700 LANGER MESOMELIC DYSPLASIA; LMD
312865 SHORT STATURE HOMEOBOX; SHOX
OMIM 249700 LANGER MESOMELIC DYSPLASIA; LMD
312865 SHORT STATURE HOMEOBOX; SHOX
Omim Description DYSCHONDROSTEOSIS, HOMOZYGOUS
  LANGER TYPE MESOMELIC DWARFISM
  MESOMELIC DWARFISM OF THE HYPOPLASTIC ULNA, FIBULA AND MANDIBLE TYPE
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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How to Order
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  • GM20217 - B-Lymphocyte
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