NA15753
DNA from Fibroblast
Description:
TRICHOTHIODYSTROPHY; TTD ICHTHYOSIFORM ERYTHRODERMA WITH HAIR ABNORMALITY AND MENTAL AND GROWTH RETARDATION, INCLUDED
EXCISION-REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 2; ERCC2
|
Repository
|
NIGMS Human Genetic Cell Repository
|
| Subcollection |
Heritable Diseases |
| Class |
Disorders of Uncertain Biochemical Etiology |
| Class |
Repair Defective and Chromosomal Instability Syndromes |
| Quantity |
10 µg |
| Quantitation Method |
Please see our FAQ |
|
Cell Type
|
Fibroblast
|
|
Transformant
|
Untransformed
|
|
Sample Source
|
DNA from Fibroblast
|
|
Race
|
White
|
|
Relation to Proband
|
proband
|
|
Confirmation
|
Molecular characterization before cell line submission to CCR
|
|
Species
|
Homo sapiens
|
|
Common Name
|
Human
|
|
Remarks
|
|
| Passage Frozen |
10 |
| |
| Gene |
ERCC2 |
| Chromosomal Location |
19q13.2-q13.3 |
| Allelic Variant 1 |
R722W; TRICHOTHIODYSTROPHY |
| Identified Mutation |
ARG722TRP; Compound heterozygote for mutations in the ERCC2 gene: one allele carries a C>T transition at nucleotide 2242 resulting in the substitution of tryptophan for arginine [Arg722Trp (R722W)]. |
| |
| Gene |
ERCC2 |
| Chromosomal Location |
19q13.2-q13.3 |
| Allelic Variant 2 |
R616P; TRICHOTHIODYSTROPHY |
| Identified Mutation |
ARG616PRO; Compound heterozygote for mutations in the ERCC2 gene: one allele carries G>C transversion at nucleotide 1925 resulting in the substitution of proline for arginine [Arg616Pro (R616P)]. |
| Remarks |
Cpd heterozygote; one allele carries a C>T transition at nucleotide 2242 resulting in Arg722Trp (R722W); 2nd allele carries G>C transversion at nucleotide 1925 resulting in Arg616Pro (R616P) in the ERCC2 gene |
| Rajkumar-Calkins AS, Szalat R, Dreze M, Khan I, Frazier Z, Reznichenkov E, Schnorenberg MR, Tsai YF, Nguyen H, Kochupurakkal B, D'Andrea AD, Shapiro GI, Lazaro JB, Mouw KW, Functional profiling of nucleotide Excision repair in breast cancer DNA repair82:102697 2019 |
| PubMed ID: 31499327 |
| |
| Cleaver JE, Thompson LH, Richardson AS, States JC, A summary of mutations in the UV-sensitive disorders: xeroderma pigmentosum,
Cockayne syndrome, and trichothiodystrophy. Hum Mutat14(1):9-22 1999 |
| PubMed ID: 10447254 |
| |
| Taylor EM, Broughton BC, Botta E, Stefanini M, Sarasin A, Jaspers NG, Fawcett
H, Harcourt SA, Arlett CF, Lehmann AR, Xeroderma pigmentosum and trichothiodystrophy are associated with different
mutations in the XPD (ERCC2) repair/transcription gene. Proc Natl Acad Sci U S A94(16):8658-63 1997 |
| PubMed ID: 9238033 |
| |
| Broughton BC, Steingrimsdottir H, Weber CA, Lehmann AR, Mutations in the xeroderma pigmentosum group D DNA repair/transcription gene in patients with trichothiodystrophy. Nat Genet7:189-94 1994 |
| PubMed ID: 7920640 |
| |
| Stefanini M, Lagomarsini P, Giliani S, Nardo T, Botta E, Peserico A, Kleijer WJ, Lehmann AR, Sarasin A, Genetic heterogeneity of the excision repair defect associated with trichothiodystrophy. Carcinogenesis14:1101-5 1993 |
| PubMed ID: 8508495 |
| dbSNP |
dbSNP ID: 18162 |
| Gene Cards |
ERCC2 |
| Gene Ontology |
GO:0000287 magnesium ion binding |
|
GO:0003677 DNA binding |
|
GO:0004003 ATP-dependent DNA helicase activity |
|
GO:0005515 protein binding |
|
GO:0005524 ATP binding |
|
GO:0005634 nucleus |
|
GO:0005675 transcription factor TFIIH complex |
|
GO:0006283 transcription-coupled nucleotide-excision repair |
|
GO:0006355 regulation of transcription, DNA-dependent |
|
GO:0006366 transcription from Pol II promoter |
|
GO:0006917 induction of apoptosis |
|
GO:0007605 perception of sound |
|
GO:0016787 hydrolase activity |
|
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
|
GO:0043139 5' to 3' DNA helicase activity |
| NCBI Gene |
Gene ID:2068 |
|
Gene ID:7269 |
| NCBI GTR |
126340 EXCISION REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 2; ERCC2 |
|
601675 TRICHOTHIODYSTROPHY 1, PHOTOSENSITIVE; TTD1 |
| OMIM |
126340 EXCISION REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 2; ERCC2 |
|
601675 TRICHOTHIODYSTROPHY 1, PHOTOSENSITIVE; TTD1 |
| Omim Description |
IBIDS SYNDROME, INCLUDED |
| |
ICHTHYOSIS, CONGENITAL, WITH TRICHOTHIODYSTROPHY, INCLUDED |
| |
TAY SYNDROME, INCLUDED |
| |
TRICHOTHIODYSTROPHY WITH CONGENITAL ICHTHYOSIS, INCLUDED |
| |
TRICHOTHIODYSTROPHY; TTDICHTHYOSIFORM ERYTHRODERMA WITH HAIR ABNORMALITY AND MENTAL AND GROWTHRETARDATION, INCLUDED |
|
|